Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822786.1_cds_XP_016501271.1_15019
CDS Infomation

[gene=LOC107819652] [db_xref=GeneID:107819652] [protein=BRCA1-associated RING domain protein 1-like] [protein_id=XP_016501271.1] [location=join(65425..65697,65930..66030,66552..66738,66838..66956,67872..67962,68653..68818,69157..69275,69438..69782)] [gbkey=CDS]
Sequence

ATGCGCTGCATAGTTGGGCATGAAGATATATTTCATGAAAGGGATGTGAAGAGGCAAAAG
AAACTAAGTTCTGGTTCGTCCCAAATGAGCTTAGGAAGTCATGGTCATATTCAACTAAGA
TGTCCTAGTTCTGAAATTGTTGCTAACTCCAACTGCAATATGGAGTATAAAAATAGTGAG
TCTCCTTCTGTTGGTGAGCCAAAATCAATTTCAGATCAACATCCTCTGAAAGGAAGTGTT
TGTGGTTTCTGTCATTCGCCTAAGACCACAAAGGGAACTGGACAGTTCTTGTACTATGCT
AATGGAAAGGAAGTGGTGGAAAATGTCACTTCTCCGTCCAAAGTCATATGTGTGCACAGT
AAATGCATTGAATGGACACCTCGAGTATTTTATGATGGAGATACTATAAAGAATTTGAAA
ATTGAACTGGCAAGAGCTGCAAAACTCAGATGTAGTAGTTGTGGCATGAAAGGTGCAGCA
CTTGGCTGCTACGTAAAATCTTGCCGGAGGAGTTATCACGTTCCCTGTGCATTTGAAATC
CAGGATTGTCGATGGGATATGGACAACTATCTCATGTTGTGCCCAATTCATAAATCTACT
AAATTTCCAACTGAGAAGTCAAATTCCAGGAAGCACGTTAGGAGGGAAGTGCATCAAGCG
ACTTCAGATATTCCTCCTCTAACCGCTGAGCAATTGAGTTTTTGGGCAAGATCATCAGGT
GGACCCAAAGAATGGGTTCTTTGTGGGTCTGCTCTATCCTCGGAAGAGAAGTATGTGTTG
GTGACATTTGCTAATATGTGTGGTGCGACTGTGTGCAAGTTTTGGAAACCAAATGTCACA
CATGTTGTTGCAGCAACAGATGAAAAGGGTGCATGCACTAGAACATTTAAAGTTCTCATG
GCAATTTTGAGTGGAAAATGGATCCTAACGATGGACTGGGTAAAAGCTTGTATTGCAGCA
AATGGTCCAATAAAGGAGGAACTTTATGAAATAAGTTTAGACAATCACGGCTGTTCTGGG
GGCCCCAAAGCTGGAAGGCTCAGGGTCTCAACTAATGCTCCAAAGCTTTTTGATGGTTTC
AAGTTTTATTTGAGTGGGGATTTTGTGCCAACTTACAAAGTTGACCTGTTAAATCTAGTT
GAGAAGGCTGGAGGCGCTAGCATTCAGAGCAAGGAACAGTTGGTGGAACAGACTCATGCT
GCACAGGAAACTCACCCACCTTATCTAGTTGTATACAACTGTGATCCCCCACAGGGTTGC
ATGTTTGAAGAAGAAAGCGTTATTTTGAAGCAAAGATTAGCTGAAGCTGAGGATCTCGCC
AAGCAAATTGGTTGTCAGGTCATTCAGCATACTTGGATTCTGGAGTGTGTTGCTGCATGT
AAACTGGTACCTTTTTGCTGA

Peptide Sequence

PEP ID

XP_016501271.1
PEP Infomation

PREDICTED: BRCA1-associated RING domain protein 1-like [Nicotiana tabacum]
Sequence

MRCIVGHEDIFHERDVKRQKKLSSGSSQMSLGSHGHIQLRCPSSEIVANSNCNMEYKNSE
SPSVGEPKSISDQHPLKGSVCGFCHSPKTTKGTGQFLYYANGKEVVENVTSPSKVICVHS
KCIEWTPRVFYDGDTIKNLKIELARAAKLRCSSCGMKGAALGCYVKSCRRSYHVPCAFEI
QDCRWDMDNYLMLCPIHKSTKFPTEKSNSRKHVRREVHQATSDIPPLTAEQLSFWARSSG
GPKEWVLCGSALSSEEKYVLVTFANMCGATVCKFWKPNVTHVVAATDEKGACTRTFKVLM
AILSGKWILTMDWVKACIAANGPIKEELYEISLDNHGCSGGPKAGRLRVSTNAPKLFDGF
KFYLSGDFVPTYKVDLLNLVEKAGGASIQSKEQLVEQTHAAQETHPPYLVVYNCDPPQGC
MFEEESVILKQRLAEAEDLAKQIGCQVIQHTWILECVAACKLVPFC

Transcript Sequence

Gene sequence data has not been registered.